BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A01LP1|AL430462
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1770 0.0
>3x_Contig1805
Length = 19369
Score = 1770 bits (892), Expect = 0.0
Identities = 902/905 (99%), Gaps = 1/905 (0%)
Strand = Plus / Minus
Query: 1 gatccaaatcgcgttagn-ccaagttctttaatgtactccagcttcgaatcaataccttt 59
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14908 gatccaaatcgcgttagctccaagttctttaatgtactccagcttcgaatcaataccttt 14849
Query: 60 gatatcaccccatccatcatggttagagtctttgaaactagcagggtaaacctggtaaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14848 gatatcaccccatccatcatggttagagtctttgaaactagcagggtaaacctggtaaac 14789
Query: 120 aattgcttctttccaccactttgggtctgtttgggggtgctcggatacaaacttggtaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14788 aattgcttctttccaccactttgggtctgtttgggggtgctcggatacaaacttggtaat 14729
Query: 180 cgtcatacttgatgtttttttgcgcttaacgtttcgatctgtttgagtytattctctctt 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14728 cgtcatacttgatgtttttttgcgcttaacgtttcgatctgtttgagtctattctctctt 14669
Query: 240 attttttcttgcagcgatcgtcctgtcatacctttggaataacgcttttttataatcttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14668 attttttcttgcagcgatcgtcctgtcatacctttggaataacgcttttttataatcttt 14609
Query: 300 ctggtcctggtttgtaacacttaacaattgagcaagttttatccagctgaacagacatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14608 ctggtcctggtttgtaacacttaacaattgagcaagttttatccagctgaacagacatga 14549
Query: 360 cagtaatatgactatctgtttgatgttatgctagacaagatacaccttgaaagagaccgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14548 cagtaatatgactatctgtttgatgttatgctagacaagatacaccttgaaagagaccgg 14489
Query: 420 gtggagtcatgagtttttggggtggaactagaaacagcgttttccccacacctttcttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14488 gtggagtcatgagtttttggggtggaactagaaacagcgttttccccacacctttcttca 14429
Query: 480 acgtgctgtactgttctagatggcgtctggcatgaccatctatcgaagttattaccattc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14428 acgtgctgtactgttctagatggcgtctggcatgaccatctatcgaagttattaccattc 14369
Query: 540 tgttgaatgcagccaattttttttgaaaaacaaaagttagtagtttcaactaaaagtaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14368 tgttgaatgcagccaattttttttgaaaaacaaaagttagtagtttcaactaaaagtaat 14309
Query: 600 agaaactttgctcgagggaaacggaaaaatggagaaattttctcgagggaaaaggaaaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14308 agaaactttgctcgagggaaacggaaaaatggagaaattttctcgagggaaaaggaaaaa 14249
Query: 660 cgtagtttctgtgaggaaagtgaaaagggcaaaaaaaatgaaatctccccagatgtggtc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14248 cgtagtttctgtgaggaaagtgaaaagggcaaaaaaaatgaaatctccccagatgtggtc 14189
Query: 720 acaagtaatacgggtggaaattttcctgtacgtgaattctatagaacagccttatctcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14188 acaagtaatacgggtggaaattttcctgtacgtgaattctatagaacagccttatctcaa 14129
Query: 780 atgtcgctttggtttcccaaacacaaaaagtatgcagagattttccgtcttcaccatgtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14128 atgtcgctttggtttcccaaacacaaaaagtatgcagagattttccgtcttcaccatgtt 14069
Query: 840 tttccccatatttgttttcatacatcggaagaaaatccggggtaacaaagaatgttcaca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14068 tttccccatatttgttttcatacatcggaagaaaatccggggtaacaaagaatgttcaca 14009
Query: 900 aaaga 904
|||||
Sbjct: 14008 aaaga 14004
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7418
Number of Sequences: 1807
Number of extensions: 7418
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)